chr13:112221297:G>A Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr13:112,221,297-112,221,297 |
| hg38 | chr13:111,568,950-111,568,950 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.023 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| <0.001 | Malignant Childhood Neoplasm | We determined serum AMH levels (a marker of ovarian reserve) in adult survivors ... | BeFree | 23360674 | Detail |
| 0.002 | Menopause present (finding) | [Loci at chromosomes 13, 19 and 20 influence age at natural menopause.] | GAD | 19448619 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| We determined serum AMH levels (a marker of ovarian reserve) in adult survivors of childhood cancer ... | DisGeNET | Detail |
| [Loci at chromosomes 13, 19 and 20 influence age at natural menopause.] | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs7333181 dbSNP
- Genome
- hg19
- Position
- chr13:112,221,297-112,221,297
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs7333181
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.0231
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 387
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
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